STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sspJSmall, acid-soluble spore protein J; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type cp: cell process (46 aa)    
Predicted Functional Partners:
sspO
Small acid-soluble spore protein o (minor); Belongs to the SspO family
      
 0.784
sspL
Small, acid-soluble spore protein L; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type cp: cell process
      
 0.784
sspG
Small, acid-soluble spore protein G; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor
      
 0.713
yurS
Uncharacterized protein YurS; Evidence 5: No homology to any previously reported sequences; PubMedId: 9852018
      
 0.642
sspD
Small acid-soluble spore protein d (minor alpha/beta-type sasp); SASP are bound to spore DNA. They are double-stranded DNA- binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to UV light
      
 0.588
sspH
Small acid-soluble spore protein h (minor); Belongs to the SspH family
      
 0.585
sspN
Small acid-soluble spore protein n (minor); Belongs to the SspN family
      
 0.583
sspK
Small acid-soluble spore protein k (minor); Belongs to the SspK family
      
 0.582
sspM
Small, acid-soluble spore protein M; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type cp: cell process
      
 0.582
sspP
Small acid-soluble spore protein p (minor); Belongs to the SspP family
      
 0.581
Your Current Organism:
Bacillus subtilis
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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