Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| epsC | epsO | BSU34350 | BSU34220 | Putative UDP-sugar epimerase; Involved in biofilm formation; Belongs to the polysaccharide synthase family. | Putative pyruvyl transferase; May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles; Belongs to the polysaccharide pyruvyl transferase family. | 0.970 |
| epsC | yvfG | BSU34350 | BSU34210 | Putative UDP-sugar epimerase; Involved in biofilm formation; Belongs to the polysaccharide synthase family. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.483 |
| epsO | epsC | BSU34220 | BSU34350 | Putative pyruvyl transferase; May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles; Belongs to the polysaccharide pyruvyl transferase family. | Putative UDP-sugar epimerase; Involved in biofilm formation; Belongs to the polysaccharide synthase family. | 0.970 |
| epsO | yvfG | BSU34220 | BSU34210 | Putative pyruvyl transferase; May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles; Belongs to the polysaccharide pyruvyl transferase family. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.482 |
| sigL | yvfG | BSU34200 | BSU34210 | RNA polymerase sigma-54 factor (sigma-L); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is responsible for the expression of the levanase operon. The open complex (sigma-54 and core RNA polymerase) serves as the receptor for receipt of the melting signal from the remotely bound activator protein LevR for the expression of the levanase operon. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.612 |
| yvfG | epsC | BSU34210 | BSU34350 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Putative UDP-sugar epimerase; Involved in biofilm formation; Belongs to the polysaccharide synthase family. | 0.483 |
| yvfG | epsO | BSU34210 | BSU34220 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Putative pyruvyl transferase; May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles; Belongs to the polysaccharide pyruvyl transferase family. | 0.482 |
| yvfG | sigL | BSU34210 | BSU34200 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | RNA polymerase sigma-54 factor (sigma-L); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is responsible for the expression of the levanase operon. The open complex (sigma-54 and core RNA polymerase) serves as the receptor for receipt of the melting signal from the remotely bound activator protein LevR for the expression of the levanase operon. | 0.612 |