Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cotG | ywrF | BSU36070 | BSU36080 | Spore morphogenetic protein; May be a morphogenetic protein that is required for the incorporation of protein CotB into the spore coat. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.459 |
| hemY | ywrF | BSU10140 | BSU36080 | Protoporphyrinogen IX and coproporphyrinogen III oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. Also oxidizes the pathway intermediate coproporphyrinogen-III. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.457 |
| mhqA | ydfO | BSU12870 | BSU05490 | Putative hydroquinone-specific extradiol dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | Putative dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | 0.462 |
| mhqA | yodD | BSU12870 | BSU19560 | Putative hydroquinone-specific extradiol dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | Putative hydrolase; Putative hydrolase that may contribute to the degradation of aromatic compounds. | 0.993 |
| mhqA | yodE | BSU12870 | BSU19570 | Putative hydroquinone-specific extradiol dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | Putative lyase/dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | 0.412 |
| mhqA | ywrF | BSU12870 | BSU36080 | Putative hydroquinone-specific extradiol dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.451 |
| ribAB | ywrF | BSU23260 | BSU36080 | Fused GTP cyclohydrolase II and 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.451 |
| ydfO | mhqA | BSU05490 | BSU12870 | Putative dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | Putative hydroquinone-specific extradiol dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | 0.462 |
| ydfO | yodD | BSU05490 | BSU19560 | Putative dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | Putative hydrolase; Putative hydrolase that may contribute to the degradation of aromatic compounds. | 0.985 |
| ydfO | ywrF | BSU05490 | BSU36080 | Putative dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.476 |
| yodD | mhqA | BSU19560 | BSU12870 | Putative hydrolase; Putative hydrolase that may contribute to the degradation of aromatic compounds. | Putative hydroquinone-specific extradiol dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | 0.993 |
| yodD | ydfO | BSU19560 | BSU05490 | Putative hydrolase; Putative hydrolase that may contribute to the degradation of aromatic compounds. | Putative dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | 0.985 |
| yodD | yodE | BSU19560 | BSU19570 | Putative hydrolase; Putative hydrolase that may contribute to the degradation of aromatic compounds. | Putative lyase/dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | 0.999 |
| yodD | ywrF | BSU19560 | BSU36080 | Putative hydrolase; Putative hydrolase that may contribute to the degradation of aromatic compounds. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.614 |
| yodE | mhqA | BSU19570 | BSU12870 | Putative lyase/dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | Putative hydroquinone-specific extradiol dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | 0.412 |
| yodE | yodD | BSU19570 | BSU19560 | Putative lyase/dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | Putative hydrolase; Putative hydrolase that may contribute to the degradation of aromatic compounds. | 0.999 |
| yodE | ywrF | BSU19570 | BSU36080 | Putative lyase/dioxygenase; Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.405 |
| ywrE | ywrF | BSU36090 | BSU36080 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.456 |
| ywrF | cotG | BSU36080 | BSU36070 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Spore morphogenetic protein; May be a morphogenetic protein that is required for the incorporation of protein CotB into the spore coat. | 0.459 |
| ywrF | hemY | BSU36080 | BSU10140 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Protoporphyrinogen IX and coproporphyrinogen III oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. Also oxidizes the pathway intermediate coproporphyrinogen-III. | 0.457 |
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