STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywmBUncharacterized protein YwmB; Evidence 4: Homologs of previously reported genes of unknown function (246 aa)    
Predicted Functional Partners:
murAA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine. Essential for cell growth; Belongs to the EPSP synthase family. MurA subfamily
     
 0.851
yqzE
Uncharacterized protein YqzE; Evidence 4: Homologs of previously reported genes of unknown function
  
   
 0.783
ypjB
Uncharacterized protein YpjB; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type m: membrane component
  
     0.763
ybaK
Uncharacterized protein YbaK; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme
  
     0.750
yqfZ
Uncharacterized protein YqfZ; Evidence 2a: Function of homologous gene experimentally demonstrated in an other organism; Product type ph: phenotype
  
     0.750
ysxE
Uncharacterized protein YsxE; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type cp: cell process
  
     0.747
spo0B
Sporulation initiation phosphotransferase B; Key element in the phosphorelay regulating sporulation initiation. Acts on spo0A. Mediates reversible phosphoryl transfer from spo0F to spo0A
  
     0.746
ywzB
Uncharacterized membrane protein YwzB; Evidence 4: Homologs of previously reported genes of unknown function
     
 0.736
yqhP
Uncharacterized protein YqhP; Evidence 4: Homologs of previously reported genes of unknown function
  
     0.729
yjaU
Uncharacterized protein YjaU; Evidence 4: Homologs of previously reported genes of unknown function
  
     0.723
Your Current Organism:
Bacillus subtilis
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis, Bacillus subtilis 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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