STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywhHUncharacterized protein YwhH; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf: putative factor (157 aa)    
Predicted Functional Partners:
ydjC
Conserved hypothetical protein; Uncharacterized protein YdjC; Evidence 4: Homologs of previously reported genes of unknown function
     
 0.901
ycxB
Hypothetical protein; Uncharacterized protein YcxB; Evidence 5: No homology to any previously reported sequences
      
 0.900
ydeK
Uncharacterized transporter YdeK; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter
     
 0.900
yrkS
Rna polymerase sporulation-specific sigma-k factor precursor (sigma-27) (c-terminal fragment); Uncharacterized protein YrkS; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor
      
 0.900
yraK
Putative hydrolase; Belongs to the AB hydrolase superfamily
      
 0.900
yurS
Uncharacterized protein YurS; Evidence 5: No homology to any previously reported sequences; PubMedId: 9852018
      
 0.880
yisB
Uncharacterized protein YisB; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme
     
 0.811
yyaJ
Mfs transporter, putative metabolite:h+ symporter; Putative metabolite transport protein YyaJ; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt: putative transporter
     
 0.733
yurT
Putative methylglyoxalase; Belongs to the glyoxalase I family
     
 0.723
yybP
Uncharacterized lipoprotein YybP; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter
      
 0.611
Your Current Organism:
Bacillus subtilis
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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