Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| comZ | med | BSU11310 | BSU11300 | Putative late competence gene; Negatively regulates the transcription of the comG operon. | Positive regulator of comK; Positive activator of the comK gene; Belongs to the BMP lipoprotein family. | 0.868 |
| comZ | yjaU | BSU11310 | BSU11280 | Putative late competence gene; Negatively regulates the transcription of the comG operon. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.465 |
| comZ | yjaV | BSU11310 | BSU11290 | Putative late competence gene; Negatively regulates the transcription of the comG operon. | Putative NAD(P) binding enzyme; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.568 |
| med | comZ | BSU11300 | BSU11310 | Positive regulator of comK; Positive activator of the comK gene; Belongs to the BMP lipoprotein family. | Putative late competence gene; Negatively regulates the transcription of the comG operon. | 0.868 |
| med | yjaU | BSU11300 | BSU11280 | Positive regulator of comK; Positive activator of the comK gene; Belongs to the BMP lipoprotein family. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | 0.476 |
| med | yjaV | BSU11300 | BSU11290 | Positive regulator of comK; Positive activator of the comK gene; Belongs to the BMP lipoprotein family. | Putative NAD(P) binding enzyme; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.578 |
| ydcC | yhaL | BSU04630 | BSU09940 | Putative lipoprotein; required for efficient sporulation. | Sporulation factor; Required for efficient sporulation. | 0.836 |
| ydcC | yhbH | BSU04630 | BSU08980 | Putative lipoprotein; required for efficient sporulation. | Factor involved in shape determination (sporulation); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor. | 0.499 |
| ydcC | yjaV | BSU04630 | BSU11290 | Putative lipoprotein; required for efficient sporulation. | Putative NAD(P) binding enzyme; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.919 |
| ydcC | yqfD | BSU04630 | BSU25350 | Putative lipoprotein; required for efficient sporulation. | Stage IV sporulation protein; Evidence 2a: Function of homologous gene experimentally demonstrated in an other organism; Product type cp: cell process. | 0.900 |
| yhaL | ydcC | BSU09940 | BSU04630 | Sporulation factor; Required for efficient sporulation. | Putative lipoprotein; required for efficient sporulation. | 0.836 |
| yhaL | yhbH | BSU09940 | BSU08980 | Sporulation factor; Required for efficient sporulation. | Factor involved in shape determination (sporulation); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor. | 0.675 |
| yhaL | yjaV | BSU09940 | BSU11290 | Sporulation factor; Required for efficient sporulation. | Putative NAD(P) binding enzyme; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.979 |
| yhaL | yqfD | BSU09940 | BSU25350 | Sporulation factor; Required for efficient sporulation. | Stage IV sporulation protein; Evidence 2a: Function of homologous gene experimentally demonstrated in an other organism; Product type cp: cell process. | 0.620 |
| yhbH | ydcC | BSU08980 | BSU04630 | Factor involved in shape determination (sporulation); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor. | Putative lipoprotein; required for efficient sporulation. | 0.499 |
| yhbH | yhaL | BSU08980 | BSU09940 | Factor involved in shape determination (sporulation); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor. | Sporulation factor; Required for efficient sporulation. | 0.675 |
| yhbH | yjaV | BSU08980 | BSU11290 | Factor involved in shape determination (sporulation); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor. | Putative NAD(P) binding enzyme; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.863 |
| yhbH | yqfD | BSU08980 | BSU25350 | Factor involved in shape determination (sporulation); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor. | Stage IV sporulation protein; Evidence 2a: Function of homologous gene experimentally demonstrated in an other organism; Product type cp: cell process. | 0.541 |
| yjaU | comZ | BSU11280 | BSU11310 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Putative late competence gene; Negatively regulates the transcription of the comG operon. | 0.465 |
| yjaU | med | BSU11280 | BSU11300 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. | Positive regulator of comK; Positive activator of the comK gene; Belongs to the BMP lipoprotein family. | 0.476 |
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