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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sodC1Superoxide dismutase (Cu/Zn); Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family. (169 aa)    
Predicted Functional Partners:
sodA
Superoxide dismutase (Fe/Mn family); Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.872
petB
Cytochrome b.
    
 
 0.868
aq_1253
Putative protein.
    
   0.846
fdhE
Formate dehydrogenase formation protein FdhE; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
       0.776
tlpA
Thiol disulfide interchange protein.
   
 0.746
fdoI
Formate dehydrogenase gamma subunit.
       0.719
fdoH
Formate dehydrogenase beta subunit.
       0.717
fdoG
Formate dehydrogenase alpha subunit.
       0.683
petA
Rieske-I iron sulfur protein.
    
   0.614
soxF
Rieske-I iron sulfur protein.
    
   0.614
Your Current Organism:
Aquifex aeolicus
NCBI taxonomy Id: 224324
Other names: A. aeolicus VF5, Aquifex aeolicus VF5, Aquifex aeolicus str. VF5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.