rpmF protein (Aquifex aeolicus) - STRING interaction network

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Score

rpmF

Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (63 aa)

Predicted Functional Partners:

rpmJ

0.999

rpmB

0.999

rpsN

0.999

rpsF

0.997

rpsR

0.997

rplQ

0.997

rpsM

0.997

rpsP

0.997

rplU

0.997

rpsT

0.997

Your Current Organism:

Aquifex aeolicus

NCBI taxonomy Id: 224324
Other names: A. aeolicus VF5, Aquifex aeolicus VF5, Aquifex aeolicus str. VF5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplQ	rplU	aq_069	aq_1641a	Ribosomal protein L17.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.997
rplQ	rpmB	aq_069	aq_080	Ribosomal protein L17.	Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.998
rplQ	rpmF	aq_069	aq_1102	Ribosomal protein L17.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.997
rplQ	rpmJ	aq_069	aq_075	Ribosomal protein L17.	Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.999
rplQ	rpsF	aq_069	aq_063	Ribosomal protein L17.	Ribosomal protein S06; Binds together with S18 to 16S ribosomal RNA.	0.997
rplQ	rpsM	aq_069	aq_074	Ribosomal protein L17.	Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.	0.999
rplQ	rpsN	aq_069	aq_1651a	Ribosomal protein L17.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.997
rplQ	rpsP	aq_069	aq_123	Ribosomal protein L17.	Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.997
rplQ	rpsR	aq_069	aq_064a	Ribosomal protein L17.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.996
rplQ	rpsT	aq_069	aq_1767	Ribosomal protein L17.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.991
rplU	rplQ	aq_1641a	aq_069	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L17.	0.997
rplU	rpmB	aq_1641a	aq_080	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplU	rpmF	aq_1641a	aq_1102	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.997
rplU	rpmJ	aq_1641a	aq_075	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.997
rplU	rpsF	aq_1641a	aq_063	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S06; Binds together with S18 to 16S ribosomal RNA.	0.997
rplU	rpsM	aq_1641a	aq_074	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.	0.997
rplU	rpsN	aq_1641a	aq_1651a	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.998
rplU	rpsP	aq_1641a	aq_123	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.997
rplU	rpsR	aq_1641a	aq_064a	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.996
rplU	rpsT	aq_1641a	aq_1767	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.997