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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
forB2Ferredoxin oxidoreductase beta subunit. (289 aa)    
Predicted Functional Partners:
forA2
Ferredoxin oxidoreductase alpha subunit.
 
 0.999
forG2
Ferredoxin oxidoreductase gamma subunit.
 
 0.999
forA1
Ferredoxin oxidoreductase alpha subunit.
 
 0.999
forG1
Ferredoxin oxidoreductase gamma subunit.
 
 0.999
fdx2
Ferredoxin.
  
 0.992
oadA
Oxaloacetate decarboxylase alpha chain.
   
 
 0.920
ppsA
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
    
 0.918
gltA
Citrate synthase.
   
 
 0.915
ilvB
Acetolactate synthase large subunit.
  
 
 0.912
lpdA
Dihydrolipoamide dehydrogenase.
     
 0.909
Your Current Organism:
Aquifex aeolicus
NCBI taxonomy Id: 224324
Other names: A. aeolicus VF5, Aquifex aeolicus VF5, Aquifex aeolicus str. VF5
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