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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspDGeneral secretion pathway protein D. (625 aa)    
Predicted Functional Partners:
aq_1473
Putative protein.
 
 
 0.993
aq_1286
Putative protein.
 
     0.932
pilC2
Fimbrial assembly protein PilC2.
 
  
 0.896
gspG
General secretion pathway protein G.
  
 0.836
aq_1287
Putative protein.
       0.773
gspE
General secretion pathway protein E.
 
  
 0.641
hspC
Small heat shock protein (class I); Belongs to the small heat shock protein (HSP20) family.
       0.594
fliN
Flagellar switch protein FliN; FliM is one of 2 proteins (FliG, FliN) that might form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (Potential). Belongs to the FliN/MopA/SpaO family.
  
  
 0.522
aq_585
Hypothetical protein; Belongs to the bacterial secretin family.
 
   
0.496
fliI
Flagellar export protein; Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum.
  
  
 0.490
Your Current Organism:
Aquifex aeolicus
NCBI taxonomy Id: 224324
Other names: A. aeolicus VF5, Aquifex aeolicus VF5, Aquifex aeolicus str. VF5
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