Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aq_173 | aq_175a | aq_173 | aq_175a | Putative protein. | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.773 |
aq_173 | aq_178 | aq_173 | aq_178 | Putative protein. | Putative protein; Belongs to the universal stress protein A family. | 0.611 |
aq_173 | atpB | aq_173 | aq_179 | Putative protein. | ATP synthase F0 subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.611 |
aq_173 | atpE | aq_173 | aq_177 | Putative protein. | ATP synthase F0 subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.636 |
aq_173 | hisF | aq_173 | aq_181 | Putative protein. | HisF (cyclase); IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit (By similarity). | 0.452 |
aq_173 | mutY2 | aq_173 | aq_172 | Putative protein. | Endonuclease III. | 0.773 |
aq_173 | rpmH | aq_173 | aq_176 | Putative protein. | Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.773 |
aq_173 | yidC | aq_173 | aq_175 | Putative protein. | Hypothetical protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.773 |
aq_175a | aq_173 | aq_175a | aq_173 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Putative protein. | 0.773 |
aq_175a | aq_178 | aq_175a | aq_178 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Putative protein; Belongs to the universal stress protein A family. | 0.611 |
aq_175a | atpB | aq_175a | aq_179 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | ATP synthase F0 subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.662 |
aq_175a | atpE | aq_175a | aq_177 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | ATP synthase F0 subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.683 |
aq_175a | hisF | aq_175a | aq_181 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | HisF (cyclase); IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit (By similarity). | 0.452 |
aq_175a | mutY2 | aq_175a | aq_172 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Endonuclease III. | 0.773 |
aq_175a | rpmH | aq_175a | aq_176 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.867 |
aq_175a | yidC | aq_175a | aq_175 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Hypothetical protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.962 |
aq_178 | aq_173 | aq_178 | aq_173 | Putative protein; Belongs to the universal stress protein A family. | Putative protein. | 0.611 |
aq_178 | aq_175a | aq_178 | aq_175a | Putative protein; Belongs to the universal stress protein A family. | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.611 |
aq_178 | atpB | aq_178 | aq_179 | Putative protein; Belongs to the universal stress protein A family. | ATP synthase F0 subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.773 |
aq_178 | atpE | aq_178 | aq_177 | Putative protein; Belongs to the universal stress protein A family. | ATP synthase F0 subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.748 |
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