Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aq_1220 | dmt | aq_1220 | aq_1899 | Putative protein. | Dolichol-phosphate mannosyltransferase. | 0.802 |
aq_1236 | aq_1695a | aq_1236 | aq_1695a | Hypothetical protein. | Hypothetical protein. | 0.754 |
aq_1236 | dmt | aq_1236 | aq_1899 | Hypothetical protein. | Dolichol-phosphate mannosyltransferase. | 0.597 |
aq_1695a | aq_1236 | aq_1695a | aq_1236 | Hypothetical protein. | Hypothetical protein. | 0.754 |
aq_1695a | dmt | aq_1695a | aq_1899 | Hypothetical protein. | Dolichol-phosphate mannosyltransferase. | 0.807 |
aq_1899a | dmt | aq_1899a | aq_1899 | Putative protein. | Dolichol-phosphate mannosyltransferase. | 0.566 |
aq_1899a | folD | aq_1899a | aq_1898 | Putative protein. | Methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.566 |
aq_1899a | serA | aq_1899a | aq_1905 | Putative protein. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.637 |
aq_765 | dmt | aq_765 | aq_1899 | Putative protein. | Dolichol-phosphate mannosyltransferase. | 0.558 |
degT | dmt | aq_1724 | aq_1899 | Transcriptional regulator (DegT/DnrJ/Eryc1 family); Belongs to the DegT/DnrJ/EryC1 family. | Dolichol-phosphate mannosyltransferase. | 0.568 |
degT | fmt | aq_1724 | aq_2131 | Transcriptional regulator (DegT/DnrJ/Eryc1 family); Belongs to the DegT/DnrJ/EryC1 family. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.471 |
degT | mpg | aq_1724 | aq_718 | Transcriptional regulator (DegT/DnrJ/Eryc1 family); Belongs to the DegT/DnrJ/EryC1 family. | Mannose-1-phosphate guanyltransferase. | 0.873 |
dmt | aq_1220 | aq_1899 | aq_1220 | Dolichol-phosphate mannosyltransferase. | Putative protein. | 0.802 |
dmt | aq_1236 | aq_1899 | aq_1236 | Dolichol-phosphate mannosyltransferase. | Hypothetical protein. | 0.597 |
dmt | aq_1695a | aq_1899 | aq_1695a | Dolichol-phosphate mannosyltransferase. | Hypothetical protein. | 0.807 |
dmt | aq_1899a | aq_1899 | aq_1899a | Dolichol-phosphate mannosyltransferase. | Putative protein. | 0.566 |
dmt | aq_765 | aq_1899 | aq_765 | Dolichol-phosphate mannosyltransferase. | Putative protein. | 0.558 |
dmt | degT | aq_1899 | aq_1724 | Dolichol-phosphate mannosyltransferase. | Transcriptional regulator (DegT/DnrJ/Eryc1 family); Belongs to the DegT/DnrJ/EryC1 family. | 0.568 |
dmt | fmt | aq_1899 | aq_2131 | Dolichol-phosphate mannosyltransferase. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.637 |
dmt | folD | aq_1899 | aq_1898 | Dolichol-phosphate mannosyltransferase. | Methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.773 |
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