STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssfNa(+):solute symporter (Ssf family); Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (487 aa)    
Predicted Functional Partners:
aq_2107
Hypothetical protein.
 
    0.957
aq_2108
Putative protein.
 
    0.891
hemB
Porphobilinogen synthase; Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen (By similarity).
       0.757
acuC2
Acetoin utilization protein.
       0.757
acs
Acetyl-coenzyme A synthetase c-terminal fragment.
  
  
 0.687
acs-2
Acetyl-coenzyme A synthetase.
  
  
 0.687
gltA
Citrate synthase.
  
  
 0.421
aq_2113
Putative protein.
       0.401
Your Current Organism:
Aquifex aeolicus
NCBI taxonomy Id: 224324
Other names: A. aeolicus VF5, Aquifex aeolicus VF5, Aquifex aeolicus str. VF5
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