Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| HemD | cobA | aq_1771 | aq_207 | Putative protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | uroporphyrin-III c-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.979 |
| HemD | gsa | aq_1771 | aq_816 | Putative protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Glutamate-1-semialdehyde aminotransferase. | 0.687 |
| HemD | hemA | aq_1771 | aq_1279 | Putative protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Glutamyl tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.768 |
| HemD | hemB | aq_1771 | aq_2109 | Putative protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Porphobilinogen synthase; Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen (By similarity). | 0.952 |
| HemD | hemC | aq_1771 | aq_263 | Putative protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.997 |
| acuC2 | aq_2107 | aq_2110 | aq_2107 | Acetoin utilization protein. | Hypothetical protein. | 0.757 |
| acuC2 | aq_2108 | aq_2110 | aq_2108 | Acetoin utilization protein. | Putative protein. | 0.757 |
| acuC2 | hemB | aq_2110 | aq_2109 | Acetoin utilization protein. | Porphobilinogen synthase; Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen (By similarity). | 0.787 |
| acuC2 | ssf | aq_2110 | aq_2106 | Acetoin utilization protein. | Na(+):solute symporter (Ssf family); Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.757 |
| aq_2107 | acuC2 | aq_2107 | aq_2110 | Hypothetical protein. | Acetoin utilization protein. | 0.757 |
| aq_2107 | aq_2108 | aq_2107 | aq_2108 | Hypothetical protein. | Putative protein. | 0.951 |
| aq_2107 | hemB | aq_2107 | aq_2109 | Hypothetical protein. | Porphobilinogen synthase; Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen (By similarity). | 0.757 |
| aq_2107 | ssf | aq_2107 | aq_2106 | Hypothetical protein. | Na(+):solute symporter (Ssf family); Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.957 |
| aq_2108 | acuC2 | aq_2108 | aq_2110 | Putative protein. | Acetoin utilization protein. | 0.757 |
| aq_2108 | aq_2107 | aq_2108 | aq_2107 | Putative protein. | Hypothetical protein. | 0.951 |
| aq_2108 | hemB | aq_2108 | aq_2109 | Putative protein. | Porphobilinogen synthase; Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen (By similarity). | 0.757 |
| aq_2108 | ssf | aq_2108 | aq_2106 | Putative protein. | Na(+):solute symporter (Ssf family); Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.891 |
| cobA | HemD | aq_207 | aq_1771 | uroporphyrin-III c-methyltransferase; Belongs to the precorrin methyltransferase family. | Putative protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.979 |
| cobA | hemA | aq_207 | aq_1279 | uroporphyrin-III c-methyltransferase; Belongs to the precorrin methyltransferase family. | Glutamyl tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.558 |
| cobA | hemB | aq_207 | aq_2109 | uroporphyrin-III c-methyltransferase; Belongs to the precorrin methyltransferase family. | Porphobilinogen synthase; Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen (By similarity). | 0.741 |
page 1 of 3