Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aq_2060 | fabD | aq_2060 | aq_892 | Hypothetical protein. | malonyl-CoA:Acyl carrier protein transacylase. | 0.624 |
aq_2060 | mltG | aq_2060 | aq_775 | Hypothetical protein. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.529 |
aq_2060 | tmk | aq_2060 | aq_969 | Hypothetical protein. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.668 |
aq_768 | aq_770 | aq_768 | aq_770 | Hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Putative protein. | 0.470 |
aq_768 | aq_771 | aq_768 | aq_771 | Hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Putative protein. | 0.418 |
aq_768 | mltG | aq_768 | aq_775 | Hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.480 |
aq_768 | tly | aq_768 | aq_773 | Hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Hemolysin. | 0.409 |
aq_770 | aq_768 | aq_770 | aq_768 | Putative protein. | Hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.470 |
aq_770 | aq_771 | aq_770 | aq_771 | Putative protein. | Putative protein. | 0.974 |
aq_770 | mltG | aq_770 | aq_775 | Putative protein. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.681 |
aq_770 | tly | aq_770 | aq_773 | Putative protein. | Hemolysin. | 0.656 |
aq_771 | aq_768 | aq_771 | aq_768 | Putative protein. | Hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.418 |
aq_771 | aq_770 | aq_771 | aq_770 | Putative protein. | Putative protein. | 0.974 |
aq_771 | mltG | aq_771 | aq_775 | Putative protein. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.770 |
aq_771 | tly | aq_771 | aq_773 | Putative protein. | Hemolysin. | 0.752 |
aroE | mltG | aq_901 | aq_775 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.550 |
fabD | aq_2060 | aq_892 | aq_2060 | malonyl-CoA:Acyl carrier protein transacylase. | Hypothetical protein. | 0.624 |
fabD | mltG | aq_892 | aq_775 | malonyl-CoA:Acyl carrier protein transacylase. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.568 |
fabD | ribD1 | aq_892 | aq_138 | malonyl-CoA:Acyl carrier protein transacylase. | Riboflavin specific deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the N-terminal section; belongs to the cytidine and deoxycytidylate deaminase family. | 0.506 |
fabD | tmk | aq_892 | aq_969 | malonyl-CoA:Acyl carrier protein transacylase. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.667 |
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