Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aq_040 | aq_1862 | aq_040 | aq_1862 | Putative protein. | Putative protein. | 0.729 |
aq_040 | aq_880 | aq_040 | aq_880 | Putative protein. | Hypothetical protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | 0.457 |
aq_040 | soxF | aq_040 | aq_234 | Putative protein. | Rieske-I iron sulfur protein. | 0.665 |
aq_1106 | aq_1741 | aq_1106 | aq_1741 | Hypothetical protein. | Putative protein. | 0.582 |
aq_1106 | aq_1862 | aq_1106 | aq_1862 | Hypothetical protein. | Putative protein. | 0.462 |
aq_1106 | aq_880 | aq_1106 | aq_880 | Hypothetical protein. | Hypothetical protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | 0.804 |
aq_1106 | fliC | aq_1106 | aq_1998 | Hypothetical protein. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.403 |
aq_1106 | soxF | aq_1106 | aq_234 | Hypothetical protein. | Rieske-I iron sulfur protein. | 0.667 |
aq_1741 | aq_1106 | aq_1741 | aq_1106 | Putative protein. | Hypothetical protein. | 0.582 |
aq_1741 | aq_880 | aq_1741 | aq_880 | Putative protein. | Hypothetical protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | 0.455 |
aq_1862 | aq_040 | aq_1862 | aq_040 | Putative protein. | Putative protein. | 0.729 |
aq_1862 | aq_1106 | aq_1862 | aq_1106 | Putative protein. | Hypothetical protein. | 0.462 |
aq_1862 | aq_880 | aq_1862 | aq_880 | Putative protein. | Hypothetical protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | 0.478 |
aq_880 | aq_040 | aq_880 | aq_040 | Hypothetical protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | Putative protein. | 0.457 |
aq_880 | aq_1106 | aq_880 | aq_1106 | Hypothetical protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | Hypothetical protein. | 0.804 |
aq_880 | aq_1741 | aq_880 | aq_1741 | Hypothetical protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | Putative protein. | 0.455 |
aq_880 | aq_1862 | aq_880 | aq_1862 | Hypothetical protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | Putative protein. | 0.478 |
aq_880 | fliC | aq_880 | aq_1998 | Hypothetical protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.457 |
aq_880 | minC | aq_880 | aq_878 | Hypothetical protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization (By similarity). Belongs to the MinC family. | 0.567 |
aq_880 | minD2 | aq_880 | aq_877 | Hypothetical protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | Septum site-determining protein MinD. | 0.567 |
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