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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0041Polysaccharide ABC transporter, ATP-binding protein (rfbB-1); Similar to GP:1235661 percent identity: 42.49; identified by sequence similarity; putative. (237 aa)    
Predicted Functional Partners:
AF_0042
Polysaccharide ABC transporter, permease protein (rfbA-1); Similar to PID:765058 SP:Q48478 percent identity: 27.53; identified by sequence similarity; putative.
 0.999
AF_0289
Polysaccharide ABC transporter, permease protein (rfbA-2); Similar to PID:567182 SP:Q48475 percent identity: 28.46; identified by sequence similarity; putative.
 
 0.996
AF_0984
ABC transporter, ATP-binding protein; Similar to SP:P46903 PID:973330 PID:2415726 GB:AL009126 percent identity: 35.16; identified by sequence similarity; putative.
 
   
0.888
AF_0043
First mannosyl transferase (wbaZ-1); Similar to GB:X61917 PID:47012 percent identity: 30.03; identified by sequence similarity; putative.
  
 
 0.719
AF_0045
Mannosyltransferase A (mtfA); Similar to PID:598470 percent identity: 38.74; identified by sequence similarity; putative.
 
 0.666
AF_0393
ABC transporter, ATP-binding protein; Similar to PID:1001492 PID:1001505 percent identity: 34.55; identified by sequence similarity; putative.
 
   
0.580
AF_1841
Cobalt transport ATP-binding protein (cbiO-2); Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
    
0.577
AF_0321
Glycosyl transferase; Similar to GP:1666509 percent identity: 30.69; identified by sequence similarity; putative.
 
  
 0.469
AF_1005
ABC transporter, ATP-binding protein, putative; Similar to SP:P37624 PID:912462 PID:2367231 percent identity: 26.69; identified by sequence similarity; putative.
      0.460
AF_0046
Predicted coding region AF_0046; Hypothetical protein; identified by GeneMark; putative.
 
     0.424
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.