Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0043First mannosyl transferase (wbaZ-1); Similar to GB:X61917 PID:47012 percent identity: 30.03; identified by sequence similarity; putative. (363 aa)    
Predicted Functional Partners:
AF_0041
Polysaccharide ABC transporter, ATP-binding protein (rfbB-1); Similar to GP:1235661 percent identity: 42.49; identified by sequence similarity; putative.
  
 
 0.718
AF_0042
Polysaccharide ABC transporter, permease protein (rfbA-1); Similar to PID:765058 SP:Q48478 percent identity: 27.53; identified by sequence similarity; putative.
  
  
 0.705
AF_0595
Polysaccharide biosynthesis protein, putative; Similar to GB:L77117 PID:1591720 percent identity: 24.05; identified by sequence similarity; putative.
 
  
 0.615
AF_0325
Glucose-1-phosphate thymidylyltransferase (graD-2); Similar to PID:763512 percent identity: 43.11; identified by sequence similarity; putative.
 
  
 0.595
AF_0324
dTDP-glucose 4,6-dehydratase (rfbB); Similar to PID:567874 percent identity: 50.00; identified by sequence similarity; putative.
 
  
 0.586
AF_1728
Galactosyltransferase; Similar to GB:L77117 PID:1591721 percent identity: 26.94; identified by sequence similarity; putative.
  
     0.563
AF_0322
Rhamnosyl transferase (rfbQ); Similar to GB:L07293 PID:152781 percent identity: 27.54; identified by sequence similarity; putative.
 
  
 0.514
AF_0321
Glycosyl transferase; Similar to GP:1666509 percent identity: 30.69; identified by sequence similarity; putative.
 
  
 0.467
AF_0046
Predicted coding region AF_0046; Hypothetical protein; identified by GeneMark; putative.
 
   
 0.439
AF_0581
dolichol-P-glucose synthetase, putative; Similar to GB:L77117 SP:Q58619 PID:1591853 percent identity: 27.50; identified by sequence similarity; putative.
 
  
 0.433
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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