Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0045Mannosyltransferase A (mtfA); Similar to PID:598470 percent identity: 38.74; identified by sequence similarity; putative. (1213 aa)    
Predicted Functional Partners:
AF_0041
Polysaccharide ABC transporter, ATP-binding protein (rfbB-1); Similar to GP:1235661 percent identity: 42.49; identified by sequence similarity; putative.
 
 0.667
AF_0290
Polysaccharide ABC transporter, ATP-binding protein (rfbB-2); Similar to PID:1653127 percent identity: 43.93; identified by sequence similarity; putative.
 
 0.638
AF_0324
dTDP-glucose 4,6-dehydratase (rfbB); Similar to PID:567874 percent identity: 50.00; identified by sequence similarity; putative.
  
  
 0.531
AF_0325
Glucose-1-phosphate thymidylyltransferase (graD-2); Similar to PID:763512 percent identity: 43.11; identified by sequence similarity; putative.
  
  
 0.531
AF_0595
Polysaccharide biosynthesis protein, putative; Similar to GB:L77117 PID:1591720 percent identity: 24.05; identified by sequence similarity; putative.
  
  
 0.531
AF_0289
Polysaccharide ABC transporter, permease protein (rfbA-2); Similar to PID:567182 SP:Q48475 percent identity: 28.46; identified by sequence similarity; putative.
 
  
 0.523
AF_0042
Polysaccharide ABC transporter, permease protein (rfbA-1); Similar to PID:765058 SP:Q48478 percent identity: 27.53; identified by sequence similarity; putative.
 
  
 0.515
AF_1097
Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase (manC); Similar to PID:559389 percent identity: 43.08; identified by sequence similarity; putative; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.509
AF_0046
Predicted coding region AF_0046; Hypothetical protein; identified by GeneMark; putative.
   
 0.508
AF_0302
UDP-glucose dehydrogenase (ugd-1); Similar to GB:L77117 PID:1591706 percent identity: 43.83; identified by sequence similarity; putative.
 
  
 0.499
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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