Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
AF_0049Predicted coding region AF_0049; Hypothetical protein; identified by GeneMark; putative. (412 aa)    
Predicted Functional Partners:
AF_1275
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57629 PID:1498937 percent identity: 51.82; identified by sequence similarity; putative.
 
  
 0.856
AF_1556
Conserved hypothetical protein; Similar to PID:1652988 percent identity: 38.22; identified by sequence similarity; putative.
 
  
 0.816
AF_0559
Conserved hypothetical protein; Similar to PID:1652988 percent identity: 38.22; identified by sequence similarity; putative.
 
  
 0.809
AF_2097
Conserved hypothetical protein; Similar to GB:L77117 PID:1592033 percent identity: 34.93; identified by sequence similarity; putative; Belongs to the LarC family.
 
  
 0.761
AF_0048
Predicted coding region AF_0048; Hypothetical protein; identified by GeneMark; putative.
       0.639
mat
Conserved hypothetical protein; Catalyzes the formation of S-adenosylmethionine from methionine and ATP; Belongs to the AdoMet synthase 2 family.
       0.574
cbiM
Cobalamin biosynthesis protein (cbiM-1); Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
    0.498
AF_1843
Cobalamin biosynthesis protein (cbiM-2); May be involved in nickel transport; Belongs to the CbiM family. NikM subfamily.
  
    0.498
pyrE
Orotate phosphoribosyl transferase (pyrE); Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.495
AF_0806
L-lactate permease (lctP); Similar to SP:P33231 GB:L13970 PID:404693 PID:466741 GB:U00096 percent identity: 31.70; identified by sequence similarity; putative.
     
 0.455
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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