close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0068Conserved hypothetical protein; Similar to GB:L77117 SP:Q57826 PID:1591087 percent identity: 26.95; identified by sequence similarity; putative. (317 aa)    
Predicted Functional Partners:
AF_0071
ATP-dependent RNA helicase, putative; Similar to GB:L77117 SP:Q57828 PID:1591089 percent identity: 29.59; identified by sequence similarity; putative.
  
 
 0.971
cas5
Predicted coding region AF_0067; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA) (By similarity).
  
 
 0.954
AF_0069
Predicted coding region AF_0069; Hypothetical protein; identified by GeneMark; putative.
       0.791
AF_0070
Predicted coding region AF_0070; Hypothetical protein; identified by GeneMark; putative.
       0.791
AF_1872
Predicted coding region AF_1872; Hypothetical protein; identified by GeneMark; putative.
  
 
 0.773
AF_1875
Predicted coding region AF_1875; Hypothetical protein; identified by GeneMark; putative.
   
 
 0.747
AF_1874
Predicted coding region AF_1874; Hypothetical protein; identified by GeneMark; putative.
  
 
 0.723
AF_0072
Conserved hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA).
     
 0.565
AF_0065
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58384 PID:1591637 percent identity: 29.77; identified by sequence similarity; putative.
       0.492
AF_0066
Predicted coding region AF_0066; Hypothetical protein; identified by GeneMark; putative.
       0.492
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.