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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0073Predicted coding region AF_0073; Hypothetical protein; identified by GeneMark; putative. (28 aa)    
Predicted Functional Partners:
AF_0074
Biotin operon repressor/biotin--[acetyl CoA carboxylase] ligase (birA); Similar to SP:P42975 PID:1146239 PID:755608 PID:773349 GB:AL009126 percent identity: 36.59; identified by sequence similarity; putative.
       0.443
AF_0075
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58387 PID:1591640 percent identity: 30.21; identified by sequence similarity; putative.
       0.400
AF_0076
Iron-sulfur cluster binding protein; Similar to GB:D14422 SP:P30132 PID:216575 PID:882606 GB:U00096 percent identity: 32.71; identified by sequence similarity; putative.
       0.400
AF_0077
Aldehyde ferredoxin oxidoreductase (aor-2); Similar to PID:736274 percent identity: 32.65; identified by sequence similarity; putative.
       0.400
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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