Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0090Dehydrase; Similar to GB:X63449 PID:46810 percent identity: 34.15; identified by sequence similarity; putative. (293 aa)    
Predicted Functional Partners:
AF_0091
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (hpcE-1); Similar to GB:L77117 PID:1500558 percent identity: 44.51; identified by sequence similarity; putative.
 
    0.978
AF_0089
long-chain-fatty-acid--CoA ligase (fadD-1); Similar to SP:P29212 GB:L02649 GB:X70994 PID:581070 GB:U00096 percent identity: 31.91; identified by sequence similarity; putative.
     
 0.631
AF_0557
Flavoprotein reductase; Similar to GP:1480407 percent identity: 26.19; identified by sequence similarity; putative.
 
 
 0.486
AF_0254
NADH oxidase (noxA-1); Similar to GB:L77117 SP:Q58065 PID:1591361 percent identity: 35.14; identified by sequence similarity; putative.
   
 0.414
AF_0273
Sarcosine oxidase, subunit alpha (soxA); Similar to PID:927591 SP:Q46337 percent identity: 31.11; identified by sequence similarity; putative.
   
 0.414
AF_0395
NADH oxidase (noxA-2); Similar to GB:L77117 SP:Q58065 PID:1591361 percent identity: 35.45; identified by sequence similarity; putative.
   
 0.414
AF_0400
NADH oxidase (noxA-3); Similar to GB:L77117 SP:Q58065 PID:1591361 percent identity: 40.85; identified by sequence similarity; putative.
   
 0.414
AF_0951
NADH oxidase (noxA-4); Similar to GB:L77117 SP:Q58065 PID:1591361 percent identity: 36.71; identified by sequence similarity; putative.
   
 0.414
AF_1858
NADH oxidase (noxA-5); Similar to GB:L77117 SP:Q58065 PID:1591361 percent identity: 34.00; identified by sequence similarity; putative.
   
 0.414
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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