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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0119Conserved hypothetical protein; Similar to GB:L77117 SP:Q58031 PID:1591324 percent identity: 34.12; identified by sequence similarity; putative. (442 aa)    
Predicted Functional Partners:
atpB
H+-transporting ATP synthase, subunit B (atpB); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
  
    0.669
atpA
H+-transporting ATP synthase, subunit A (atpA); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit (By similarity); Belongs to the ATPase alpha/beta chains family.
  
    0.665
atpD
H+-transporting ATP synthase, subunit D (atpD); Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
    0.630
atpC
H+-transporting ATP synthase, subunit C (atpC); Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
    0.608
atpE
H+-transporting ATP synthase, subunit E (atpE); Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
    0.543
AF_0117
Pyruvate formate-lyase activating enzyme (act-1); Similar to GB:L77117 PID:1591858 percent identity: 25.47; identified by sequence similarity; putative.
       0.521
AF_0118
Predicted coding region AF_0118; Hypothetical protein; identified by GeneMark; putative.
       0.521
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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