Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AF_0142Cytochrome C oxidase, subunit II, putative; Similar to GB:L09121 PID:155085 SP:P98052 percent identity: 38.04; identified by sequence similarity; putative. (153 aa)    
Predicted Functional Partners:
AF_0143
Conserved hypothetical protein; Similar to GB:L77117 PID:1592228 percent identity: 25.53; identified by sequence similarity; putative.
   
 0.996
AF_0144
Cytochrome C oxidase, subunit II (cbaB); Similar to GB:L09121 PID:155085 SP:P98052 percent identity: 34.18; identified by sequence similarity; putative.
 
 
 0.995
AF_0190
Cytochrome C oxidase, subunit II, putative; Similar to GB:M94110 SP:Q04441 PID:142786 percent identity: 31.71; identified by sequence similarity; putative.
  
 0.995
ctaB
Cytochrome C oxidase folding protein (coxD); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
 
 0.990
AF_1831
F420H2:quinone oxidoreductase, 41.2 kDa subunit, putative; Similar to SP:P06255 percent identity: 34.77; identified by sequence similarity; putative.
   
 0.987
AF_1828
NADH dehydrogenase, subunit 3; Similar to SP:P25707 percent identity: 24.30; identified by sequence similarity; putative.
  
 0.983
AF_1827
F420H2:quinone oxidoreductase, 43.2 kDa subunit, putative; Similar to PID:882405 SP:P50973 percent identity: 26.99; identified by sequence similarity; putative.
   
 0.978
AF_1830
F420H2:quinone oxidoreductase, 45 kDa subunit (nuoD); Similar to PIR:S45666 percent identity: 80.00; identified by sequence similarity; putative.
   
 
 0.926
rps7
SSU ribosomal protein S7P (rps7P); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.915
AF_1829
F420H2:quinone oxidoreductase, 39.7 kDa subunit, putative; Similar to SP:P15602 percent identity: 44.09; identified by sequence similarity; putative.
  
 
 0.903
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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