Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0143Conserved hypothetical protein; Similar to GB:L77117 PID:1592228 percent identity: 25.53; identified by sequence similarity; putative. (469 aa)    
Predicted Functional Partners:
AF_0142
Cytochrome C oxidase, subunit II, putative; Similar to GB:L09121 PID:155085 SP:P98052 percent identity: 38.04; identified by sequence similarity; putative.
   
 0.996
AF_0144
Cytochrome C oxidase, subunit II (cbaB); Similar to GB:L09121 PID:155085 SP:P98052 percent identity: 34.18; identified by sequence similarity; putative.
 
  
 0.974
AF_0141
Predicted coding region AF_0141; Hypothetical protein; identified by GeneMark; putative.
     
 0.829
AF_0190
Cytochrome C oxidase, subunit II, putative; Similar to GB:M94110 SP:Q04441 PID:142786 percent identity: 31.71; identified by sequence similarity; putative.
  
  
 0.757
AF_0140
Ubiquinone/menaquinone biosynthesis methyltransferase (ubiE); Similar to GB:M87049 SP:P27851 PID:148231 GB:U00096 PID:2367307 percent identity: 31.00; identified by sequence similarity; putative.
     
 0.738
AF_0154
Conserved hypothetical protein; Similar to GP:1787253 percent identity: 28.11; identified by sequence similarity; putative.
 
    0.557
ttrA
Molybdopterin oxidoreductase, molybdopterin binding subunit, putative; Part of a membrane-bound tetrathionate reductase that catalyzes the reduction of tetrathionate to thiosulfate. TtrA is the catalytic subunit (By similarity).
 
  
 0.527
AF_0027
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57801 PID:1592284 percent identity: 31.51; identified by sequence similarity; putative.
  
     0.523
AF_0166
Ferredoxin (fdx-2); Similar to SP:P29604 percent identity: 49.15; identified by sequence similarity; putative.
 
   
 0.522
AF_2235
Conserved hypothetical protein; Similar to PID:1652823 percent identity: 26.74; identified by sequence similarity; putative.
 
   
 0.510
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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