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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0144Cytochrome C oxidase, subunit II (cbaB); Similar to GB:L09121 PID:155085 SP:P98052 percent identity: 34.18; identified by sequence similarity; putative. (126 aa)    
Predicted Functional Partners:
AF_0142
Cytochrome C oxidase, subunit II, putative; Similar to GB:L09121 PID:155085 SP:P98052 percent identity: 38.04; identified by sequence similarity; putative.
 
 
 0.994
AF_0143
Conserved hypothetical protein; Similar to GB:L77117 PID:1592228 percent identity: 25.53; identified by sequence similarity; putative.
 
  
 0.982
AF_0190
Cytochrome C oxidase, subunit II, putative; Similar to GB:M94110 SP:Q04441 PID:142786 percent identity: 31.71; identified by sequence similarity; putative.
  
 
 0.977
AF_1137
Predicted coding region AF_1137; Hypothetical protein; identified by GeneMark; putative.
  
 
 0.935
ctaB
Cytochrome C oxidase folding protein (coxD); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
     
  0.900
AF_0141
Predicted coding region AF_0141; Hypothetical protein; identified by GeneMark; putative.
     
 0.833
AF_0140
Ubiquinone/menaquinone biosynthesis methyltransferase (ubiE); Similar to GB:M87049 SP:P27851 PID:148231 GB:U00096 PID:2367307 percent identity: 31.00; identified by sequence similarity; putative.
       0.723
AF_0393
ABC transporter, ATP-binding protein; Similar to PID:1001492 PID:1001505 percent identity: 34.55; identified by sequence similarity; putative.
  
 
 0.722
AF_0984
ABC transporter, ATP-binding protein; Similar to SP:P46903 PID:973330 PID:2415726 GB:AL009126 percent identity: 35.16; identified by sequence similarity; putative.
  
 
 0.722
AF_1006
ABC transporter, ATP-binding protein; Similar to PID:1163122 percent identity: 35.09; identified by sequence similarity; putative.
  
 
 0.722
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.