Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0154Conserved hypothetical protein; Similar to GP:1787253 percent identity: 28.11; identified by sequence similarity; putative. (277 aa)    
Predicted Functional Partners:
ttrB
Molybdopterin oxidoreductase, iron-sulfur binding subunit; Part of a membrane-bound tetrathionate reductase that catalyzes the reduction of tetrathionate to thiosulfate. TtrB is probably involved in transfer of electrons from TtrC to TtrA (By similarity).
     
 0.627
AF_0155
Predicted coding region AF_0155; Hypothetical protein; identified by GeneMark; putative.
       0.586
AF_0156
Ferredoxin (fdx-1); Similar to SP:P00211 percent identity: 45.28; identified by sequence similarity; putative.
       0.563
AF_0143
Conserved hypothetical protein; Similar to GB:L77117 PID:1592228 percent identity: 25.53; identified by sequence similarity; putative.
 
    0.557
AF_0153
Predicted coding region AF_0153; Hypothetical protein; identified by GeneMark; putative.
       0.528
ttrA
Molybdopterin oxidoreductase, molybdopterin binding subunit, putative; Part of a membrane-bound tetrathionate reductase that catalyzes the reduction of tetrathionate to thiosulfate. TtrA is the catalytic subunit (By similarity).
 
     0.528
AF_0977
Ammonium transporter (amt-1); Similar to SP:Q10968 PID:1405956 percent identity: 44.30; identified by sequence similarity; putative.
     
 0.514
AF_1749
Ammonium transporter (amt-3); Similar to PID:1171519 SP:P54146 percent identity: 41.48; identified by sequence similarity; putative.
     
 0.514
AF_1984
Iron-dependent repressor (troR); Similar to GP:1777937 percent identity: 28.35; identified by sequence similarity; putative.
     
 0.513
AF_1746
Ammonium transporter (amt-2); Similar to PID:1001734 SP:P54147 PID:1208463 percent identity: 49.04; identified by sequence similarity; putative.
     
 0.483
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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