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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttrCPredicted coding region AF_0158; Part of a membrane-bound tetrathionate reductase that catalyzes the reduction of tetrathionate to thiosulfate. TtrC probably anchors TtrA and TtrB to the external face of the cytoplasmic membrane. May transfer electrons from membrane quinol to TtrB (By similarity). (361 aa)    
Predicted Functional Partners:
AF_0161
Molybdenum cofactor biosynthesis protein (moeA-3); Similar to PID:1001216 PID:1001210 percent identity: 30.50; identified by sequence similarity; putative.
     
 0.960
ttrD
Predicted coding region AF_0160; Binds specifically to the Tat signal peptide of the TtrA subunit of the tetrathionate reductase.
     
 0.908
ttrB
Molybdopterin oxidoreductase, iron-sulfur binding subunit; Part of a membrane-bound tetrathionate reductase that catalyzes the reduction of tetrathionate to thiosulfate. TtrB is probably involved in transfer of electrons from TtrC to TtrA (By similarity).
     
 0.880
ttrA
Molybdopterin oxidoreductase, molybdopterin binding subunit, putative; Part of a membrane-bound tetrathionate reductase that catalyzes the reduction of tetrathionate to thiosulfate. TtrA is the catalytic subunit (By similarity).
     
 0.877
AF_0156
Ferredoxin (fdx-1); Similar to SP:P00211 percent identity: 45.28; identified by sequence similarity; putative.
       0.526
AF_0155
Predicted coding region AF_0155; Hypothetical protein; identified by GeneMark; putative.
       0.506
AF_0173
Reductase, assembly protein; Similar to GB:Z26255 percent identity: 30.00; identified by sequence similarity; putative.
      
 0.459
tatC
Conserved hypothetical transmembrane protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
      
 0.455
tatA
Conserved hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
      
 0.451
AF_0162
Predicted coding region AF_0162; Hypothetical protein; identified by GeneMark; putative.
       0.420
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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