STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0163Predicted coding region AF_0163; Hypothetical protein; identified by GeneMark; putative. (183 aa)    
Predicted Functional Partners:
AF_0164
Ferredoxin-nitrite reductase (nirA); Similar to PID:1001216 PID:1001208 percent identity: 29.72; identified by sequence similarity; putative.
       0.590
AF_0165
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58397 PID:1591652 percent identity: 34.38; identified by sequence similarity; putative.
       0.590
AF_0071
ATP-dependent RNA helicase, putative; Similar to GB:L77117 SP:Q57828 PID:1591089 percent identity: 29.59; identified by sequence similarity; putative.
  
     0.585
AF_1866
Predicted coding region AF_1866; Hypothetical protein; identified by GeneMark; putative.
  
     0.547
AF_0007
Predicted coding region AF_0007; Hypothetical protein; identified by GeneMark; putative.
  
     0.523
AF_1867
Predicted coding region AF_1867; Hypothetical protein; identified by GeneMark; putative.
  
     0.481
AF_0162
Predicted coding region AF_0162; Hypothetical protein; identified by GeneMark; putative.
       0.470
AF_0180
Predicted coding region AF_0180; Hypothetical protein; identified by GeneMark; putative.
  
     0.461
AF_0012
Predicted coding region AF_0012; Hypothetical protein; identified by GeneMark; putative.
  
     0.445
AF_0901
Conserved hypothetical protein; Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA/RNA precursor pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.
  
     0.428
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.