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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0170Predicted coding region AF_0170; Hypothetical protein; identified by GeneMark; putative. (434 aa)    
Predicted Functional Partners:
AF_0171
Predicted coding region AF_0171; Hypothetical protein; identified by GeneMark; putative.
       0.773
AF_0172
Predicted coding region AF_0172; Hypothetical protein; identified by GeneMark; putative.
       0.773
AF_0169
Predicted coding region AF_0169; Hypothetical protein; identified by GeneMark; putative.
       0.700
AF_0167
Flavoprotein (fprA-1); Similar to GB:L77117 SP:Q58142 PID:1591446 percent identity: 33.23; identified by sequence similarity; putative.
 
   
 0.677
AF_0168
Arsenical resistance operon repressor, putative; Similar to GB:L77117 SP:Q57682 PID:1499006 percent identity: 36.73; identified by sequence similarity; putative.
       0.550
AF_0166
Ferredoxin (fdx-2); Similar to SP:P29604 percent identity: 49.15; identified by sequence similarity; putative.
 
     0.531
AF_1520
Flavoprotein (fprA-2); Similar to GB:L77117 SP:Q58142 PID:1591446 percent identity: 47.15; identified by sequence similarity; putative.
 
   
 0.411
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.