close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0191Predicted coding region AF_0191; Hypothetical protein; identified by GeneMark; putative. (86 aa)    
Predicted Functional Partners:
AF_0192
Predicted coding region AF_0192; Hypothetical protein; identified by GeneMark; putative.
       0.705
AF_0190
Cytochrome C oxidase, subunit II, putative; Similar to GB:M94110 SP:Q04441 PID:142786 percent identity: 31.71; identified by sequence similarity; putative.
     
 0.602
trpCD
Anthranilate synthase component II (trpD); Bifunctional enzyme that catalyzes the second and fourth steps of tryptophan biosynthetic pathway. The second step is catalyzed by the anthranilate phosphoribosyltransferase, coded by the TrpD domain and the fourth step is catalyzed by indole-3-glycerol phosphate synthase, coded by the TrpC domain (By similarity).
     
 0.561
AF_1264
Predicted coding region AF_1264; Hypothetical protein; identified by GeneMark; putative.
  
  
 0.401
AF_1270
Transcriptional regulatory protein, ArsR family; Similar to SP:P30346 GB:X65467 PID:47183 percent identity: 35.44; identified by sequence similarity; putative.
  
  
 0.401
AF_1544
Transcriptional regulatory protein, ArsR family; Similar to SP:P30346 GB:X65467 PID:47183 percent identity: 32.26; identified by sequence similarity; putative.
  
  
 0.401
AF_1697
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58948 PID:1500446 percent identity: 44.55; identified by sequence similarity; putative.
  
  
 0.401
AF_1853
Transcriptional regulatory protein, ArsR family; Similar to GB:X66866 PID:403332 SP:P52695 percent identity: 34.92; identified by sequence similarity; putative.
  
  
 0.401
AF_1869
Predicted coding region AF_1869; Hypothetical protein; identified by GeneMark; putative.
  
  
 0.401
AF_1987
Predicted coding region AF_1987; Hypothetical protein; identified by GeneMark; putative.
  
  
 0.401
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.