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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0226NADH oxidase (noxC); Similar to GB:X60110 GB:S55441 PID:48247 PID:265804 percent identity: 38.36; identified by sequence similarity; putative. (172 aa)    
Predicted Functional Partners:
cbiHC
Cobalamin biosynthesis precorrin-3 methylase (cbiH); Bifunctional enzyme with a methyltransferase domain that catalyzes the ring contraction and methylation of C-17 in cobalt-factor III to form cobalt-factor IV, and an isomerase domain that catalyzes the conversion of cobalt-precorrin-8 to cobyrinate; In the C-terminal section; belongs to the CobH family.
  
  
 0.840
AF_0224
Branched-chain amino acid ABC transporter, permease protein (braD-1); Similar to SP:P08340 GB:U00039 PID:146633 PID:466593 GB:U00096 percent identity: 25.71; identified by sequence similarity; putative.
     
 0.760
AF_0225
Branched-chain amino acid ABC transporter, permease protein (braE-1); Similar to PID:146634 percent identity: 28.72; identified by sequence similarity; putative.
       0.759
AF_0223
Branched-chain amino acid ABC transporter, periplasmic binding protein (braC-1); Similar to GB:L77117 PID:1591901 percent identity: 26.94; identified by sequence similarity; putative.
       0.738
AF_1476
Conserved hypothetical protein; Similar to GB:L04283 SP:Q02481 PID:152720 percent identity: 33.90; identified by sequence similarity; putative.
  
  
 0.613
AF_2218
Conserved hypothetical protein; Similar to SP:P54540 PID:1303954 GB:AL009126 percent identity: 40.00; identified by sequence similarity; putative.
  
  
 0.613
AF_1005
ABC transporter, ATP-binding protein, putative; Similar to SP:P37624 PID:912462 PID:2367231 percent identity: 26.69; identified by sequence similarity; putative.
  
  
 0.609
AF_1301
Predicted coding region AF_1301; Hypothetical protein; identified by GeneMark; putative.
  
  
 0.609
AF_1302
Conserved hypothetical protein; Similar to GP:1786320 percent identity: 23.12; identified by sequence similarity; putative.
  
  
 0.609
AF_1883
Daunorubicin resistance membrane protein (drrB); Similar to GB:M73758 SP:P32011 GB:L37338 PID:153231 percent identity: 27.04; identified by sequence similarity; putative.
  
  
 0.609
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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