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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0236Predicted coding region AF_0236; Hypothetical protein; identified by GeneMark; putative. (40 aa)    
Predicted Functional Partners:
AF_0237
Pantothenate permease (panF-3); Similar to PID:606198 GB:U00096 PID:1789656 percent identity: 25.11; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.773
htpX
Heat shock protein (htpX); Similar to GB:L77117 PID:1592249 percent identity: 32.95; identified by sequence similarity; putative; Belongs to the peptidase M48B family.
       0.527
AF_0234
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58298 PID:1591566 percent identity: 36.94; identified by sequence similarity; putative.
       0.454
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.