Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0248NADH-dependent flavin oxidoreductase; Similar to SP:P54550 PID:1303964 GB:AL009126 percent identity: 36.73; identified by sequence similarity; putative. (378 aa)    
Predicted Functional Partners:
AF_0286
Electron transfer flavoprotein, subunit beta (etfB); Similar to GP:1903329 percent identity: 38.80; identified by sequence similarity; putative.
  
 
 0.729
AF_0681
Succinate dehydrogenase, flavoprotein subunit A (sdhA); Similar to GP:1524302 percent identity: 48.23; identified by sequence similarity; putative.
 
  
 0.591
AF_0249
Predicted coding region AF_0249; Hypothetical protein; identified by GeneMark; putative.
       0.538
AF_0250
Predicted coding region AF_0250; Hypothetical protein; identified by GeneMark; putative.
       0.538
AF_0287
Electron transfer flavoprotein, subunit alpha (etfA); Similar to PID:596026 SP:P53571 percent identity: 39.75; identified by sequence similarity; putative.
   
 
 0.537
AF_2184
Conserved hypothetical protein; Similar to PID:1653500 percent identity: 33.33; identified by sequence similarity; putative.
       0.533
AF_2335
Conserved hypothetical protein; Similar to GP:1200033 percent identity: 39.64; identified by sequence similarity; putative.
 
  
 0.405
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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