Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0259Conserved hypothetical protein; Similar to GB:L77117 PID:1592178 percent identity: 36.45; identified by sequence similarity; putative. (123 aa)    
Predicted Functional Partners:
AF_2169
Conserved hypothetical protein; Similar to GB:L77117 PID:1592179 percent identity: 35.16; identified by sequence similarity; putative.
   
 
 0.671
AF_0257
Predicted coding region AF_0257; Hypothetical protein; identified by GeneMark; putative.
       0.563
AF_0258
Predicted coding region AF_0258; Hypothetical protein; identified by GeneMark; putative.
       0.560
AF_0947
Conserved hypothetical protein; Similar to GB:L77117 PID:1592179 percent identity: 57.14; identified by sequence similarity; putative; Belongs to the UPF0331 family. MJ1548 subfamily.
   
 
 0.434
AF_2433
Conserved hypothetical protein; Similar to GB:L77117 PID:1592179 percent identity: 38.37; identified by sequence similarity; putative; Belongs to the UPF0331 family. MJ1548 subfamily.
   
 
 0.434
AF_0598
Conserved hypothetical protein; Similar to PID:1001780 PID:1006611 percent identity: 38.31; identified by sequence similarity; putative.
  
     0.410
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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