Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0273Sarcosine oxidase, subunit alpha (soxA); Similar to PID:927591 SP:Q46337 percent identity: 31.11; identified by sequence similarity; putative. (534 aa)    
Predicted Functional Partners:
AF_0274
Sarcosine oxidase, subunit beta (soxB); Similar to SP:P40875 PID:927589 percent identity: 26.45; identified by sequence similarity; putative.
 
 0.996
AF_1328
Glycerol-3-phosphate dehydrogenase (glpA); Similar to GB:L43967 PID:1045710 SP:P47285 percent identity: 27.82; identified by sequence similarity; putative.
   
 0.822
AF_0272
Conserved hypothetical protein; Similar to GP:1934608 percent identity: 31.30; identified by sequence similarity; putative.
  
    0.742
AF_2266
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58298 PID:1591566 percent identity: 25.56; identified by sequence similarity; putative.
 
 
 0.489
AF_0558
Conserved hypothetical protein; Similar to GP:1934608 percent identity: 24.44; identified by sequence similarity; putative.
  
    0.477
AF_1717
Predicted coding region AF_1717; Hypothetical protein; identified by GeneMark; putative; To B.subtilis YrhD.
  
    0.477
rps5
SSU ribosomal protein S5P (rps5P); With S4 and S12 plays an important role in translational accuracy.
  
   0.455
AF_0115
Conserved hypothetical protein; Similar to GB:X52543 PID:46506 SP:P55177 percent identity: 31.85; identified by sequence similarity; putative.
   
  
 0.431
AF_1647
Conserved hypothetical protein; Similar to GB:X52543 PID:46506 SP:P55177 percent identity: 26.56; identified by sequence similarity; putative.
   
  
 0.431
AF_0271
Heterodisulfide reductase, subunit B, putative; Similar to GB:L77117 PID:1591456 percent identity: 35.33; identified by sequence similarity; putative.
     
 0.421
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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