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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0281Predicted coding region AF_0281; Hypothetical protein; identified by GeneMark; putative. (99 aa)    
Predicted Functional Partners:
AF_1775
Atrazine chlorohydrolase, putative; Similar to GB:L77117 SP:Q58110 PID:1591414 percent identity: 34.39; identified by sequence similarity; putative; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.674
AF_0779
Predicted coding region AF_0779; Hypothetical protein; identified by GeneMark; putative.
  
     0.652
AF_2031
Predicted coding region AF_2031; Hypothetical protein; identified by GeneMark; putative.
  
     0.641
rpl44e
LSU ribosomal protein L44E (rpl44E); Binds to the 23S rRNA.
  
     0.634
AF_1532
Conserved hypothetical protein; Similar to GB:L77117 PID:1591589 percent identity: 41.27; identified by sequence similarity; putative.
  
     0.630
AF_1952
Conserved hypothetical protein; Similar to GB:Z19055 SP:P42394 PID:396660 percent identity: 22.87; identified by sequence similarity; putative.
  
     0.630
AF_0782
Predicted coding region AF_0782; Hypothetical protein; identified by GeneMark; putative.
  
     0.626
AF_1012
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57970 PID:1591255 percent identity: 38.49; identified by sequence similarity; putative.
  
     0.624
AF_1791
Signal sequence peptidase (sec11); Similar to GB:Z47047 SP:P15367 PID:4433 PID:557828 PID:763367 percent identity: 36.30; identified by sequence similarity; putative.
  
     0.605
AF_0587
Conserved hypothetical protein; Similar to GB:L77117 PID:1499864 percent identity: 31.13; identified by sequence similarity; putative.
  
     0.596
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.