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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0282Conserved hypothetical protein; Similar to GB:L77117 SP:Q60372 PID:1498830 percent identity: 52.63; identified by sequence similarity; putative; Belongs to the UPF0212 family. (113 aa)    
Predicted Functional Partners:
AF_0281
Predicted coding region AF_0281; Hypothetical protein; identified by GeneMark; putative.
       0.581
AF_1060
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58960 PID:1500459 percent identity: 33.10; identified by sequence similarity; putative.
       0.564
AF_0283
3-ketoacyl-CoA thiolase (acaB-7); Similar to GB:L77117 PID:1592180 percent identity: 41.99; identified by sequence similarity; putative.
       0.514
AF_0284
Conserved hypothetical protein; Similar to GB:L77117 PID:1592182 percent identity: 34.34; identified by sequence similarity; putative.
       0.514
AF_0285
3-hydroxyacyl-CoA dehydrogenase (hbd-2); Similar to PID:1055222 SP:P52041 percent identity: 55.79; identified by sequence similarity; putative; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.507
rps15
SSU ribosomal protein S15P (rps15P); Similar to GB:L77117 SP:P54012 PID:1590839 percent identity: 62.00; identified by sequence similarity; putative.
   
    0.452
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.