Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AF_0290Polysaccharide ABC transporter, ATP-binding protein (rfbB-2); Similar to PID:1653127 percent identity: 43.93; identified by sequence similarity; putative. (243 aa)    
Predicted Functional Partners:
AF_0289
Polysaccharide ABC transporter, permease protein (rfbA-2); Similar to PID:567182 SP:Q48475 percent identity: 28.46; identified by sequence similarity; putative.
 
 
 0.995
AF_0042
Polysaccharide ABC transporter, permease protein (rfbA-1); Similar to PID:765058 SP:Q48478 percent identity: 27.53; identified by sequence similarity; putative.
 
 0.987
AF_0045
Mannosyltransferase A (mtfA); Similar to PID:598470 percent identity: 38.74; identified by sequence similarity; putative.
 
 0.638
cysC
Adenylylsulfate 3-phosphotransferase (cysC); Catalyzes the synthesis of activated sulfate.
  
  
 0.636
AF_0984
ABC transporter, ATP-binding protein; Similar to SP:P46903 PID:973330 PID:2415726 GB:AL009126 percent identity: 35.16; identified by sequence similarity; putative.
 
   
0.529
AF_0321
Glycosyl transferase; Similar to GP:1666509 percent identity: 30.69; identified by sequence similarity; putative.
 
  
 0.465
AF_0046
Predicted coding region AF_0046; Hypothetical protein; identified by GeneMark; putative.
 
     0.445
AF_1021
ABC transporter, ATP-binding protein; Similar to GB:L77117 PID:1499865 percent identity: 37.82; identified by sequence similarity; putative.
   
0.438
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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