Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0299Conserved hypothetical protein; Similar to GB:L77117 SP:Q58021 PID:1591313 percent identity: 41.11; identified by sequence similarity; putative. (102 aa)    
Predicted Functional Partners:
AF_0298
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58022 PID:1591314 percent identity: 31.71; identified by sequence similarity; putative; Belongs to the UPF0332 family.
       0.906
AF_1365
Hydrogenase expression/formation protein (hypE); Similar to GB:L77117 SP:Q58089 PID:1591391 percent identity: 51.52; identified by sequence similarity; putative.
       0.624
AF_1366
Hydrogenase expression/formation regulatory protein (hypF); Similar to GB:L77117 PID:1591430 percent identity: 45.08; identified by sequence similarity; putative.
       0.621
AF_0297
Predicted coding region AF_0297; Hypothetical protein; identified by GeneMark; putative.
       0.543
AF_0478
ATP-binding protein PhnP (phnP); Similar to GB:D90227 SP:P16692 PID:147213 PID:216605 PID:536936 percent identity: 30.94; identified by sequence similarity; putative.
       0.539
AF_0300
Predicted coding region AF_0300; Hypothetical protein; identified by GeneMark; putative.
       0.458
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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