Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0302UDP-glucose dehydrogenase (ugd-1); Similar to GB:L77117 PID:1591706 percent identity: 43.83; identified by sequence similarity; putative. (324 aa)    
Predicted Functional Partners:
AF_0325
Glucose-1-phosphate thymidylyltransferase (graD-2); Similar to PID:763512 percent identity: 43.11; identified by sequence similarity; putative.
  
 
 0.971
AF_0361
UDP-glucose 4-epimerase (galE-1); Similar to GB:L77117 SP:Q57664 PID:1590951 percent identity: 38.64; identified by sequence similarity; putative.
 
 0.955
AF_0596
UDP-glucose dehydrogenase (ugd-2); Similar to GB:L77117 PID:1591706 percent identity: 44.10; identified by sequence similarity; putative.
  
  
 
0.901
AF_0242
Glucose-1-phosphate thymidylyltransferase (graD-1); Similar to PID:763512 percent identity: 27.69; identified by sequence similarity; putative.
  
 
 0.887
AF_1097
Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase (manC); Similar to PID:559389 percent identity: 43.08; identified by sequence similarity; putative; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.883
AF_0595
Polysaccharide biosynthesis protein, putative; Similar to GB:L77117 PID:1591720 percent identity: 24.05; identified by sequence similarity; putative.
  
  
 0.881
AF_0324
dTDP-glucose 4,6-dehydratase (rfbB); Similar to PID:567874 percent identity: 50.00; identified by sequence similarity; putative.
  
  
 0.849
AF_0303
Predicted coding region AF_0303; Hypothetical protein; identified by GeneMark; putative.
       0.773
AF_2430
lacZ expression regulatory protein (icc); Similar to GB:D16557 SP:P36650 PID:453396 PID:882562 GB:U00096 percent identity: 29.55; identified by sequence similarity; putative.
     
 0.659
AF_2016
UDP-glucose 4-epimerase (galE-2); Similar to GB:L77117 SP:Q57664 PID:1590951 percent identity: 30.00; identified by sequence similarity; putative.
 
 
 0.554
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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