Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0318Conserved hypothetical protein; Similar to SP:Q60288 PID:1522666 GB:L77118 SP:Q60288 PID:1522666 percent identity: 32.19; identified by sequence similarity; putative. (151 aa)    
Predicted Functional Partners:
vapB7
Conserved hypothetical protein; Possibly the antitoxin component of a type II toxin-antitoxin (TA) system. Its cognate toxin is VapC7 (Potential).
       0.630
vapB5
Conserved hypothetical protein; Possibly the antitoxin component of a type II toxin-antitoxin (TA) system. Its cognate toxin is VapC5 (Potential).
       0.441
AF_0320
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58384 PID:1591637 percent identity: 39.78; identified by sequence similarity; putative.
      
0.430
AF_0317
Conserved hypothetical protein; Similar to SP:Q60288 PID:1522666 GB:L77118 SP:Q60288 PID:1522666 percent identity: 34.82; identified by sequence similarity; putative.
      
0.426
vapB4
Conserved hypothetical protein; Possibly the antitoxin component of a type II toxin-antitoxin (TA) system. Its cognate toxin is VapC4 (Potential).
       0.423
vapC
Conserved hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
      
0.407
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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