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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0331Pheromone shutdown protein (traB); Similar to GB:L77117 PID:1592009 percent identity: 40.48; identified by sequence similarity; putative. (396 aa)    
Predicted Functional Partners:
AF_0332
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57837 PID:1592287 percent identity: 42.18; identified by sequence similarity; putative; Belongs to the peptidase M50B family.
       0.847
amzA
Conserved hypothetical protein; Probable zinc metalloprotease whose natural substrate is unknown.
       0.773
AF_1652
Prepro-subtilisin sendai, putative; Similar to PID:995964 percent identity: 35.59; identified by sequence similarity; putative.
   
   0.714
AF_1653
Alkaline serine protease (aprM); Similar to PID:1225905 percent identity: 44.51; identified by sequence similarity; putative.
   
   0.714
AF_0333
4-hydroxyphenylacetate-3-hydroxylase (hpaA-1); Similar to PID:974146 percent identity: 22.35; identified by sequence similarity; putative.
       0.536
AF_0334
Predicted coding region AF_0334; Hypothetical protein; identified by GeneMark; putative.
       0.536
AF_1494
Predicted coding region AF_1494; Hypothetical protein; identified by GeneMark; putative.
 
     0.453
priL
Conserved hypothetical protein; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair.
       0.409
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.