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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_03334-hydroxyphenylacetate-3-hydroxylase (hpaA-1); Similar to PID:974146 percent identity: 22.35; identified by sequence similarity; putative. (500 aa)    
Predicted Functional Partners:
AF_0435
enoyl-CoA hydratase (fad-1); Similar to PID:755067 percent identity: 47.64; identified by sequence similarity; putative; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.948
AF_0285
3-hydroxyacyl-CoA dehydrogenase (hbd-2); Similar to PID:1055222 SP:P52041 percent identity: 55.79; identified by sequence similarity; putative; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.910
AF_1287
acetyl-CoA synthetase (acs-6); Similar to GB:L17309 SP:P39062 PID:348053 PID:2293224 GB:AL009126 percent identity: 34.29; identified by sequence similarity; putative.
    
 0.906
AF_2084
Oxaloacetate decarboxylase, sodium ion pump subunit (oadB); Similar to GB:M96434 SP:Q03031 PID:154198 percent identity: 59.83; identified by sequence similarity; putative.
     
  0.900
AF_2085
Oxaloacetate decarboxylase, biotin carboxyl carrier subunit, putative; Similar to GB:M80523 SP:P29337 PID:153584 percent identity: 38.74; identified by sequence similarity; putative.
     
  0.900
AF_2216
methylmalonyl-CoA decarboxylase, biotin carboxyl carrier subunit (mmdC); Similar to GB:L22208 GB:Z24754 PID:415596 PID:415918 percent identity: 36.22; identified by sequence similarity; putative.
     
  0.900
AF_0334
Predicted coding region AF_0334; Hypothetical protein; identified by GeneMark; putative.
       0.773
pcn
Proliferating-cell nuclear antigen (pol30); Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. Belongs to the PCNA family.
       0.542
AF_0332
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57837 PID:1592287 percent identity: 42.18; identified by sequence similarity; putative; Belongs to the peptidase M50B family.
       0.538
amzA
Conserved hypothetical protein; Probable zinc metalloprotease whose natural substrate is unknown.
       0.536
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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