Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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AF_0343Tryptophan repressor binding protein (wrbA); It seems to function in response to environmental stress when various electron transfer chains are affected or when the environment is highly oxidizing. It reduces quinones to the hydroquinone state to prevent interaction of the semiquinone with O2 and production of superoxide. It prefers NADH over NADPH; Belongs to the WrbA family. (191 aa)    
Predicted Functional Partners:
AF_0344
Desulfoferrodoxin, putative; Uses electrons from reduced NADP, by way of rubredoxin and an oxidoreductase, to catalyze the reduction of superoxide to hydrogen peroxide.
  
  
 0.794
cbiHC
Cobalamin biosynthesis precorrin-3 methylase (cbiH); Bifunctional enzyme with a methyltransferase domain that catalyzes the ring contraction and methylation of C-17 in cobalt-factor III to form cobalt-factor IV, and an isomerase domain that catalyzes the conversion of cobalt-precorrin-8 to cobyrinate; In the C-terminal section; belongs to the CobH family.
       0.602
AF_0345
Predicted coding region AF_0345; Hypothetical protein; identified by GeneMark; putative.
  
    0.527
AF_1901
Conserved hypothetical transmembrane protein; Similar to GB:L77117 SP:Q57904 PID:1591183 percent identity: 27.49; identified by sequence similarity; putative.
   
    0.507
AF_0342
Nigerythrin, putative; Similar to GP:1616801 percent identity: 33.33; identified by sequence similarity; putative.
       0.490
AF_0341
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58147 PID:1499555 percent identity: 42.86; identified by sequence similarity; putative.
       0.487
AF_0246
Iron (II) transporter (feoB-1); Similar to GB:L77117 SP:Q57986 PID:1591272 percent identity: 33.33; identified by sequence similarity; putative.
  
  
 0.441
AF_0077
Aldehyde ferredoxin oxidoreductase (aor-2); Similar to PID:736274 percent identity: 32.65; identified by sequence similarity; putative.
  
  
 0.432
AF_2281
Aldehyde ferredoxin oxidoreductase (aor-4); Similar to PID:736274 percent identity: 52.97; identified by sequence similarity; putative.
  
  
 0.432
AF_1627
Repressor protein; Similar to GB:L77117 PID:1590997 percent identity: 59.09; identified by sequence similarity; putative.
     
 0.415
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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