STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0350Conserved hypothetical transmembrane protein; Similar to PID:1652938 percent identity: 34.13; identified by sequence similarity; putative. (211 aa)    
Predicted Functional Partners:
AF_0348
Conserved hypothetical protein; Similar to PID:1196911 percent identity: 32.76; identified by sequence similarity; putative.
       0.787
AF_0349
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57997 PID:1591284 percent identity: 40.96; identified by sequence similarity; putative.
     
 0.784
AF_0347
C4-dicarboxylate transporter (mae1); Similar to GB:L77117 SP:Q58172 PID:1591472 percent identity: 30.25; identified by sequence similarity; putative.
       0.515
AF_2268
Predicted coding region AF_2268; Hypothetical protein; identified by GeneMark; putative.
  
     0.497
AF_1810
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57567 PID:1498868 percent identity: 43.77; identified by sequence similarity; putative.
  
     0.468
AF_1302
Conserved hypothetical protein; Similar to GP:1786320 percent identity: 23.12; identified by sequence similarity; putative.
 
     0.411
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.