STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0359Conserved hypothetical protein; Similar to GB:L77117 PID:1591757 percent identity: 32.88; identified by sequence similarity; putative. (79 aa)    
Predicted Functional Partners:
AF_1532
Conserved hypothetical protein; Similar to GB:L77117 PID:1591589 percent identity: 41.27; identified by sequence similarity; putative.
    
   0.900
AF_0360
Conserved hypothetical protein; Similar to GP:1707838 percent identity: 31.42; identified by sequence similarity; putative.
       0.807
AF_2321
Conserved hypothetical protein; Similar to GB:L77117 PID:1591756 percent identity: 40.12; identified by sequence similarity; putative.
  
    0.782
dapF
Diaminopimelate epimerase (dapF); Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine.
       0.605
AF_0357
Predicted coding region AF_0357; Hypothetical protein; identified by GeneMark; putative.
       0.533
AF_0358
DNA repair protein RAD25; Similar to GB:M31899 SP:P19447 PID:182179 percent identity: 32.49; identified by sequence similarity; putative.
       0.533
rpiA
Ribose 5-phosphate isomerase (rpi); Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
   
    0.444
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.