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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0420Conserved hypothetical protein; Similar to GB:L77117 PID:1591955 percent identity: 34.78; identified by sequence similarity; putative; Belongs to the UPF0248 family. (69 aa)    
Predicted Functional Partners:
AF_0421
Predicted coding region AF_0421; Hypothetical protein; identified by GeneMark; putative.
       0.864
AF_0418
Conserved hypothetical protein; Similar to GB:L77117 PID:1591840 percent identity: 26.21; identified by sequence similarity; putative.
       0.773
AF_0419
Conserved hypothetical protein; Similar to GB:L77117 PID:1591754 percent identity: 48.18; identified by sequence similarity; putative; Belongs to the BtpA family.
       0.773
AF_0422
uroporphyrin-III C-methyltransferase (cysG-1); Similar to GB:L77117 PID:1591629 percent identity: 41.74; identified by sequence similarity; putative.
       0.678
AF_0417
Predicted coding region AF_0417; Hypothetical protein; identified by GeneMark; putative.
       0.598
AF_0415
Predicted coding region AF_0415; Hypothetical protein; identified by GeneMark; putative.
       0.583
AF_0416
Conserved hypothetical protein; Similar to PID:149085 percent identity: 37.50; identified by sequence similarity; putative.
       0.583
dsrA
Sulfite reductase, subunit alpha (dsrA); Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration.
       0.470
dsrB
Sulfite reductase, subunit beta (dsrB); Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration.
       0.470
AF_0414
Predicted coding region AF_0414; Hypothetical protein; identified by GeneMark; putative.
       0.428
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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