Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0427Ferredoxin (fdx-4); Similar to SP:P08813 PID:944972 percent identity: 56.14; identified by sequence similarity; putative. (63 aa)    
Predicted Functional Partners:
dsrB
Sulfite reductase, subunit beta (dsrB); Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration.
 
  
 0.605
AF_0286
Electron transfer flavoprotein, subunit beta (etfB); Similar to GP:1903329 percent identity: 38.80; identified by sequence similarity; putative.
   
 
 0.598
dsrA
Sulfite reductase, subunit alpha (dsrA); Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration.
 
  
 0.596
AF_0426
Conserved hypothetical protein; Similar to GB:L77117 PID:1499956 percent identity: 32.95; identified by sequence similarity; putative.
       0.566
dsrD
Sulfite reductase, subunit gamma (dsrD); May play an essential role in dissimilatory sulfite reduction.
     
 0.564
AF_0143
Conserved hypothetical protein; Similar to GB:L77117 PID:1592228 percent identity: 25.53; identified by sequence similarity; putative.
 
 
 0.455
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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